ISC26: update the basics section

.gitignore

@@ -11,3 +11,5 @@ __pycache__
 /view
 /.spack-env
 /.venv
+.idea
+CLAUDE.md

common/setup.rst

@@ -6,7 +6,7 @@
 
    and then set Spack up like this::
 
-       git clone --depth=2 --branch=releases/v1.1 https://github.com/spack/spack
+       git clone --depth=2 --branch=releases/v1.2 https://github.com/spack/spack
        . spack/share/spack/setup-env.sh
        spack repo update builtin --tag v2025.11.0
        spack tutorial -y

outputs/basics.sh

@@ -9,7 +9,7 @@ project="$(dirname "$0")"
 
 export SPACK_COLOR=never
 
-# basic installation
+# Setting Up Spack
 example basics/clone           "git clone --depth=2 --branch=$tutorial_branch https://github.com/spack/spack.git ~/spack"
 example basics/clone           "cd ~/spack"
 
@@ -21,61 +21,65 @@ spack config add "config:suppress_gpg_warnings:true"
 
 example basics/source-setup     ". share/spack/setup-env.sh"
 
-# spack list
+spack repo update
+
+# Installing Packages
 example basics/list            "spack list"
 example basics/list-py         "spack list 'py-*'"
 
 # spack install
-example basics/gmake           "spack install gmake"
+example --tee basics/gmake           "spack install gmake"
 
 example basics/compiler-list   "spack compilers"
 
-example basics/mirror          "spack mirror add tutorial /mirror"
-example basics/mirror          "spack buildcache keys --install --trust"
-
-example basics/zlib-clang     "spack install zlib-ng %clang"
+example basics/mirror          "spack mirror add --unsigned tutorial /mirror"
+#example basics/mirror          "spack buildcache keys --install --trust"
 
+# The Spec Syntax
 example basics/versions-zlib  "spack versions zlib-ng"
-example basics/zlib-2.0.7       "spack install zlib-ng@2.0.7"
-example basics/zlib-gcc-10    "spack install zlib-ng %gcc@10"
+example --tee basics/zlib-2.0.7       "spack install zlib-ng@2.0.7"
 
-example basics/zlib-O3        "spack install zlib-ng@2.0.7 cflags=-O3"
-
-example basics/find            "spack find"
-example basics/find-lf         "spack find -lf"
+example basics/info-zlib      "spack info --no-dependencies --no-versions zlib-ng"
 
-example basics/tcl             "spack install tcl"
+example --tee basics/zlib-ipo        "spack install zlib-ng +ipo"
+example --tee basics/zlib-build-type "spack install zlib-ng build_type=Debug"
 
-example basics/tcl-zlib-clang "spack install tcl ^zlib-ng@2.0.7 %clang"
+example --tee basics/zlib-clang     "spack install zlib-ng %clang"
+example --tee basics/zlib-gcc-14    "spack install zlib-ng %gcc@14"
 
-zlib_hash=$(spack find --format "{hash:3}" zlib-ng cflags=-O3)
-example basics/tcl-zlib-hash  "spack install tcl ^/${zlib_hash}"
+example basics/spec-tcl-zlib-clang  "spack spec -l tcl ^zlib-ng@2.0.7 %clang"
+example --tee basics/tcl-zlib-clang "spack install tcl ^zlib-ng@2.0.7 %clang"
 
-example basics/find-ldf        "spack find -ldf"
+# Refer to the zlib-ng@2.0.7 %clang build we just installed by its hash
+zlib_hash=$(spack find --format "{hash:3}" zlib-ng@2.0.7 %clang)
+example basics/spec-tcl-zlib-hash   "spack spec tcl ^/${zlib_hash}"
 
 example basics/graph-tcl       "spack graph tcl"
 
+example basics/providers-mpi   "spack providers mpi"
 example basics/hdf5-spec       "spack spec hdf5"
-example basics/hdf5            "spack install hdf5"
-example basics/hdf5-no-mpi     "spack install hdf5~mpi"
-
-example basics/hdf5-hl-mpi     "spack install hdf5+hl+mpi ^mpich"
-
-example basics/find-ldf-2      "spack find -ldf"
-
-example basics/trilinos        "spack install trilinos"
-
-example basics/trilinos-hdf5   "spack install trilinos +hdf5 ^hdf5+hl+mpi ^mpich"
+example --tee basics/hdf5            "spack install hdf5"
+example --tee basics/hdf5-no-mpi     "spack install hdf5~mpi"
 
-example basics/find-d-trilinos "spack find -d trilinos"
-
-example basics/graph-trilinos  "spack graph trilinos"
+example --tee basics/hdf5-mpich      "spack install hdf5 ^mpich"
+example basics/spec-hdf5-compilers   "spack spec hdf5 %c,cxx=clang %fortran=gcc"
 
+# Querying Installations
+example basics/find            "spack find"
+example basics/find-l          "spack find -l"
 example basics/find-d-tcl      "spack find -d tcl"
+example basics/find-dep-mpich  "spack find ^mpich"
+example basics/find-px         "spack find -px"
 
+# A Realistic Example
+example --tee basics/trilinos        "spack install trilinos"
+example --tee basics/trilinos-hdf5   "spack install trilinos +hdf5 ^mpich"
+example basics/trilinos-find-mpich   "spack find ^mpich"
+
+# Uninstalling Packages
 example basics/find-zlib      "spack find zlib-ng"
 
-example basics/uninstall-zlib "spack uninstall -y zlib-ng %gcc@10"
+example basics/uninstall-zlib "spack uninstall -y zlib-ng %gcc@14"
 
 example basics/find-lf-zlib   "spack find -lf zlib-ng"
 
@@ -88,18 +92,11 @@ example --expect-error basics/uninstall-ambiguous "spack uninstall trilinos"
 trilinos_hash="$(spack find --format '{hash:3}' trilinos ^openmpi)"
 echo y | example basics/uninstall-specific  "spack uninstall /$trilinos_hash"
 
-example basics/find-dep-mpich      "spack find ^mpich"
-
-example basics/find-O3             "spack find cflags=-O3"
-
-example basics/find-px             "spack find -px"
-
-example basics/compilers           "spack compilers"
-
-example basics/install-gcc-12.1.0   "spack install gcc@12"
+# Customizing Compilers
+example --tee basics/install-gcc-16   "spack install gcc@16"
 
 example basics/compilers-2           "spack compilers"
 
-example basics/spec-zziplib          "spack spec zziplib %gcc@12"
+example basics/spec-zziplib          "spack spec zziplib %gcc@16"
 
-echo y | example basics/compiler-uninstall       'spack uninstall gcc@12'
+example basics/compiler-uninstall       'spack uninstall -y gcc@16'

outputs/basics/clone.out

@@ -1,9 +1,9 @@
-$ git clone --depth=2 --branch=releases/v1.1 https://github.com/spack/spack.git ~/spack
+$ git clone --depth=2 --branch=releases/v1.2 https://github.com/spack/spack.git ~/spack
 Cloning into '/home/spack/spack'...
-remote: Enumerating objects: 2343, done.K
-remote: Counting objects: 100% (2343/2343), done.K
-remote: Compressing objects: 100% (1589/1589), done.K
-remote:nTotale2343 (delta2309),3reused 1265 (delta 234), pack-reused 0 (from 0)K
-Receiving objects: 100% (2343/2343), 5.32 MiB | 18.47 MiB/s, done.
-Resolving deltas: 100% (309/309), done.
+remote: Enumerating objects: 2411, done.K
+remote: Counting objects: 100% (2411/2411), done.K
+remote: Compressing objects: 100% (1617/1617), done.K
+remote:nTotale2411 (delta2326),4reused 1328 (delta 249), pack-reused 0 (from 0)K
+Receiving objects: 100% (2411/2411), 5.48 MiB | 13.53 MiB/s, done.
+Resolving deltas: 100% (326/326), done.
 $ cd ~/spack

outputs/basics/compiler-list.out

@@ -1,7 +1,7 @@
 $ spack compilers
 ==> Available compilers
--- gcc ubuntu22.04-x86_64 ---------------------------------------
-[e]  gcc@11.4.0	 [e]  gcc@10.5.0
+-- gcc ubuntu26.04-x86_64 ---------------------------------------
+[e]  gcc@15.2.0  [e]  gcc@14.3.0
 
--- llvm ubuntu22.04-x86_64 --------------------------------------
-[e]  llvm@14.0.0
+-- llvm ubuntu26.04-x86_64 --------------------------------------
+[e]  llvm@21.1.8

outputs/basics/compiler-uninstall.out

@@ -1,6 +1,2 @@
-$ spack uninstall gcc@12
-y
-    -- linux-ubuntu22.04-x86_64_v3 / %c,cxx=gcc@11.4.0 --------------
-    fmnvqo4 gcc@12.3.0
-
-==> 1 packages will be uninstalled. Do you want to proceed? [y/N] ==> Successfully uninstalled gcc@12.3.0~binutils+bootstrap~graphite~mold~nvptx~piclibs~profiled~strip build_system=autotools build_type=RelWithDebInfo languages:='c,c++,fortran' platform=linux os=ubuntu22.04 target=x86_64_v3/fmnvqo4
+$ spack uninstall -y gcc@16
+==> Successfully uninstalled gcc@16.1.0+binutils+bootstrap~graphite+libsanitizer~mold~nvptx~piclibs+profiled+strip build_system=autotools build_type=Release languages:='c,c++,fortran' platform=linux os=ubuntu26.04 target=x86_64_v3/vlwdxlj

outputs/basics/compilers-2.out

@@ -1,7 +1,7 @@
 $ spack compilers
 ==> Available compilers
--- gcc ubuntu22.04-x86_64 ---------------------------------------
-[e]  gcc@11.4.0	 [e]  gcc@10.5.0  [+]  gcc@12.3.0
+-- gcc ubuntu26.04-x86_64 ---------------------------------------
+[e]  gcc@15.2.0  [e]  gcc@14.3.0  [+]  gcc@16.1.0
 
--- llvm ubuntu22.04-x86_64 --------------------------------------
-[e]  llvm@14.0.0
+-- llvm ubuntu26.04-x86_64 --------------------------------------
+[e]  llvm@21.1.8

outputs/basics/find-d-tcl.out

@@ -1,30 +1,12 @@
 $ spack find -d tcl
--- linux-ubuntu22.04-x86_64_v3 / %c,cxx=clang@14.0.0 ------------
+-- linux-ubuntu26.04-x86_64_v3 / %c,cxx=gcc@15.2.0 --------------
 tcl@8.6.17
-    compiler-wrapper@1.0
-    glibc@2.35
+    compiler-wrapper@1.1.0
+    gcc@15.2.0
+    gcc-runtime@15.2.0
+    glibc@2.43
     gmake@4.4.1
-	gcc@11.4.0
-	gcc-runtime@11.4.0
-    llvm@14.0.0
     zlib-ng@2.0.7
+	llvm@21.1.8
 
-
--- linux-ubuntu22.04-x86_64_v3 / %c,cxx=gcc@11.4.0 --------------
-tcl@8.6.17
-    compiler-wrapper@1.0
-    gcc@11.4.0
-    gcc-runtime@11.4.0
-    glibc@2.35
-    gmake@4.4.1
-    zlib-ng@2.0.7
-
-tcl@8.6.17
-    compiler-wrapper@1.0
-    gcc@11.4.0
-    gcc-runtime@11.4.0
-    glibc@2.35
-    gmake@4.4.1
-    zlib-ng@2.2.4
-
-==> 3 installed packages
+==> 1 installed package

outputs/basics/find-dep-mpich.out

@@ -1,7 +1,4 @@
 $ spack find ^mpich
--- linux-ubuntu22.04-x86_64_v3 / %c,cxx,fortran=gcc@11.4.0 ------
-trilinos@16.1.0
-
--- linux-ubuntu22.04-x86_64_v3 / %c=gcc@11.4.0 ------------------
+-- linux-ubuntu26.04-x86_64_v3 / %c=gcc@15.2.0 ------------------
 hdf5@1.14.6
-==> 2 installed packages
+==> 1 installed package

outputs/basics/find-l.out

@@ -0,0 +1,27 @@
+$ spack find -l
+-- linux-ubuntu26.04-x86_64 / no compilers ----------------------
+cl66sen gcc@15.2.0  ublhg65 glibc@2.43
+
+-- linux-ubuntu26.04-x86_64_v3 / %c,cxx,fortran=gcc@15.2.0 ------
+xkilhym mpich@5.0.1  qfut5qq openmpi@5.0.10
+
+-- linux-ubuntu26.04-x86_64_v3 / %c,cxx=clang@21.1.8 ------------
+kie72sp zlib-ng@2.0.7  5dji3nx zlib-ng@2.3.3
+
+-- linux-ubuntu26.04-x86_64_v3 / %c,cxx=gcc@14.3.0 --------------
+slhcf4i zlib-ng@2.3.3
+
+-- linux-ubuntu26.04-x86_64_v3 / %c,cxx=gcc@15.2.0 --------------
+sle3ix4 gettext@1.0   ldqeqfw krb5@1.22.2  m6yx5j3 openssh@10.3p1  53i7gbs tcl@8.6.17	  g72d7i3 zlib-ng@2.3.3  6l3ycpy zlib-ng@2.3.3
+ujctyey hwloc@2.13.0  ekvivpv ncurses@6.6  33yozp5 openssl@3.6.1   aeoqp4e zlib-ng@2.0.7  t7jnrlg zlib-ng@2.3.3  63aruxk zstd@1.5.7
+
+-- linux-ubuntu26.04-x86_64_v3 / %c=gcc@15.2.0 ------------------
+cbtgjrh bzip2@1.0.8  jceyzq7 hdf5@1.14.6	   vbwvgwx libiconv@1.18      2t2useu numactl@2.0.19  nldxmxw prrte@4.1.0
+cdyuto2 gmake@4.4.1  uwyh3xy libedit@3.1-20251016  qzkk5ym libpciaccess@0.17  afklka7 pigz@2.8	      f5xe4px tar@1.35
+as6mmcj hdf5@1.14.6  oopqoag libevent@2.1.12	   bkzcu2s libxcrypt@4.5.2    yvl6jpi pkgconf@2.5.1   hhjyyqy xz@5.8.3
+7cwv3st hdf5@1.14.6  itb4a2s libfabric@2.5.1	   ujlg2ua libxml2@2.15.3     ycyqykw pmix@6.1.0
+
+-- linux-ubuntu26.04-x86_64_v3 / no compilers -------------------
+mmywg7x compiler-wrapper@1.1.0	yjlog5x gcc@15.2.0	    xm76mt3 gcc-runtime@15.2.0	px4mv6l llvm@21.1.8
+5zrvmb3 gcc@14.3.0		yhhe2we gcc-runtime@15.2.0  yc4n2pp glibc@2.43
+==> 45 installed packages