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Pull requests: seqeralabs/RustQC
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chore: update actions/setup-node action to v6.5.0
renovate-actions
#150
opened Aug 24, 2026 by
seqeralabs-renovate
Bot
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1 task
chore: update actions/checkout action to v6.1.0
renovate-actions
#149
opened Aug 24, 2026 by
seqeralabs-renovate
Bot
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1 task
chore: update swatinem/rust-cache action to v2.9.2
renovate-actions
#148
opened Aug 24, 2026 by
seqeralabs-renovate
Bot
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1 task
chore: update dtolnay/rust-toolchain digest to 6c977a6
renovate-actions
#147
opened Aug 24, 2026 by
seqeralabs-renovate
Bot
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1 task
ci: extend Dependabot to cargo, npm and docker
#146
opened Aug 23, 2026 by
BenjaminDEMAILLE
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Migrate CLI parsing from clap to usage-rs
#145
opened Aug 23, 2026 by
edmundmiller
Contributor
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build(deps): update openssl-sys to 0.9.117 for OpenSSL 4 support
#144
opened Aug 23, 2026 by
BenjaminDEMAILLE
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fix: make dupRadar and Qualimap outputs reproducible run-to-run
#142
opened Aug 14, 2026 by
BenjaminDEMAILLE
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perf: parse GTF without per-line allocations (1.88x)
#140
opened Aug 14, 2026 by
BenjaminDEMAILLE
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perf: buffer all output file writers (2.4x wall clock)
#139
opened Aug 13, 2026 by
BenjaminDEMAILLE
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perf: switch flate2 to the zlib-rs backend (2.3x faster gzip)
#138
opened Aug 13, 2026 by
BenjaminDEMAILLE
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perf: use mimalloc as the global allocator in the binary
#137
opened Aug 13, 2026 by
BenjaminDEMAILLE
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feat: add align subcommand for single-pass DNA alignment QC
#136
opened Aug 13, 2026 by
BenjaminDEMAILLE
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feat: add bamqc subcommand for generic genomic BAM/CRAM QC
#135
opened Aug 13, 2026 by
BenjaminDEMAILLE
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feat: add geneBody_coverage and read_GC RSeQC tools
#134
opened Aug 13, 2026 by
BenjaminDEMAILLE
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feat: BED-interval rRNA quantification (split_bam) and featureCounts -M/-O
#133
opened Aug 13, 2026 by
BenjaminDEMAILLE
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fix: fail with a GTF-specific error when no genes can be extracted
#132
opened Aug 13, 2026 by
BenjaminDEMAILLE
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fix: count secondary+supplementary records as secondary only (flagstat)
#131
opened Aug 13, 2026 by
BenjaminDEMAILLE
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build(deps): update hts-sys to 2.2.1 for bindgen 0.72 compatibility
#130
opened Aug 13, 2026 by
BenjaminDEMAILLE
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build(deps): bump esbuild from 0.27.7 to 0.28.1 in /docs in the npm_and_yarn group across 1 directory
dependencies
Pull requests that update a dependency file
javascript
Pull requests that update javascript code
#124
opened Jul 20, 2026 by
dependabot
Bot
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build(deps): bump docker/metadata-action from 6.1.0 to 6.2.0
dependencies
Pull requests that update a dependency file
github_actions
Pull requests that update GitHub Actions code
#123
opened Jul 7, 2026 by
dependabot
Bot
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build(deps): bump docker/login-action from 4.2.0 to 4.4.0
dependencies
Pull requests that update a dependency file
github_actions
Pull requests that update GitHub Actions code
#122
opened Jul 7, 2026 by
dependabot
Bot
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build(deps): bump docker/build-push-action from 7.2.0 to 7.3.0
dependencies
Pull requests that update a dependency file
github_actions
Pull requests that update GitHub Actions code
#121
opened Jul 7, 2026 by
dependabot
Bot
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build(deps): bump docker/setup-buildx-action from 4.1.0 to 4.2.0
dependencies
Pull requests that update a dependency file
github_actions
Pull requests that update GitHub Actions code
#120
opened Jul 7, 2026 by
dependabot
Bot
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build(deps): bump actions/checkout from 6.0.3 to 7.0.0
dependencies
Pull requests that update a dependency file
github_actions
Pull requests that update GitHub Actions code
#119
opened Jun 23, 2026 by
dependabot
Bot
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