PhysiCell: Scientist end users should use latest release! Developers please fork the development branch and submit PRs to the dev branch. Thanks!
The synthetic vascular generation Python package.
Skin BioDynaMo (SkiBiDy) is a modular hybrid agent-continuum skin simulation built on BioDynaMo
Deprecated version of my parametric .gcode file generator for bioprinting research written in C. (Bad)
A simple tool for checking 3D printer run statistics.
Grasshopper algorithm for FRC-inspired scaffold generation.
The living book of Marshall
A computational pipeline for analyzing tissue regeneration in volumetric muscle loss treatment studies. Enables automated processing of histological and immunohistochemical whole slide images to quantify tissue components, inflammatory responses, and regenerative markers. Provides standardized analysis of spatial tissue heterogeneity.
Literature-based technology assessment of skin substitutes and cultured epithelial autografts for severe burn care.
A Python tool for comparing biomaterials and recommending scaffold-tissue pairings for tissue engineering applications
Source code for manuscript (under preparation). Rapid and unbiased quantification of fiber directionality in biological tissues
shsongli — independent third-party profile of a public API surface, by API Evangelist. shsongli (Shanghai Pine & Power / Songli Biotech Co., Ltd.) is a Shanghai-based biotechnology and medical-device maker specializing in the R&D, manufacture and sale of biological hemostatic products, most notably animal-derived quick-dissolving fibrin glue with i
Aspect Biosystems — independent third-party profile of a public API surface, by API Evangelist. Aspect Biosystems is a Vancouver, British Columbia biotechnology company developing Bioprinted Tissue Therapeutics — implantable, allogeneic living tissues designed to replace, repair, or supplement biological function in the body.
Landing Page - BioDimension
Motion Analysis of Ring-Shaped tissues - code from Seguret et al. 2024 eLife
Pandorum Technologies — independent third-party profile of a public API surface, by API Evangelist. Pandorum Technologies is a biotechnology company based in Bangalore, India, working in tissue engineering and regenerative medicine under the theme "building blocks of life." Its research and product pipeline spans a bioengineered cornea for corneal
Allevi — independent third-party profile of a public API surface, by API Evangelist. Allevi is a bioprinting company that designs and manufactures 3D bioprinters, bioinks, and accompanying software for tissue engineering, regenerative medicine, and life-sciences research. Its desktop bioprinters and biomaterials let researchers fabricate living tis
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