imagej-macro-scripts

Here are 5 public repositories matching this topic...

MontpellierRessourcesImagerie / imagej_macros_and_scripts

ImageJ macros and scripts written at the imaging facility MRI

imagej fiji imagej-plugins jython image-analysis-workflows imagej-macro bioimage-analysis fiji-macro toolsets imagej-macros imagej-macro-scripts

Updated Jul 23, 2026
Jupyter Notebook

bonej-org / bonej-scripts

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Helper scripts and macros using BoneJ

jython imagej-macro imagej-macros imagej-macro-scripts

Updated Jul 18, 2022
ImageJ Macro

andrejkorenic / automated-TrackMate-cell-segmentation-tracking

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Streamline fluorescent microscopy workflows with these scripts. This collection provides automated cell segmentation & tracking using TrackMate, featuring two-step segmentation, flexible temporal/spatial tracking, and efficient analysis of large datasets. Ideal for researchers automating imaging analysis.

image-processing fluorescence-microscopy-imaging segmentation-automation imagej-macro-scripts fiji-macro-language microscopy-image-analysis