Skip to content

[codex] Add Andes virus example data#20

Draft
theosanderson-agent wants to merge 3 commits intomainfrom
andes-virus-example-data
Draft

[codex] Add Andes virus example data#20
theosanderson-agent wants to merge 3 commits intomainfrom
andes-virus-example-data

Conversation

@theosanderson-agent
Copy link
Copy Markdown
Collaborator

Summary

Adds a small Andes virus example dataset for the Pathoplexus demo instance:

  • example_files/andes_virus_test_metadata.tsv with one segmented submission row
  • example_files/andes_virus_test_sequences.fasta with L, M, and S segment sequences
  • README update listing Andes virus among available example datasets

The three FASTA records use the Andes virus reference segment sequences from the existing agent-store assets for NC_003468.2, NC_003467.2, and NC_003466.1.

This PR was written by AI.

Validation

  • Confirmed the metadata header and data row both have 79 TSV fields.
  • Confirmed the FASTA contains exactly three records with lengths 6562, 3671, and 1871 bases.
  • Ran git diff --check.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

2 participants