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Add optional MissBayes Bayesian missingness workflow #10

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13 changes: 0 additions & 13 deletions ..Rcheck/00check.log
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This file was deleted.

6 changes: 6 additions & 0 deletions .Rbuildignore
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@@ -1,2 +1,8 @@
^.*\.Rproj$
^\.Rproj\.user$
^\.dockerignore$
^\.git$
^\.github$
^artifacts$
^Rplots\.pdf$
^.*\.Rcheck$
11 changes: 11 additions & 0 deletions .dockerignore
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@@ -0,0 +1,11 @@
.git
.agents
.codex
artifacts
.Rproj.user
.Rhistory
.RData
.Ruserdata
*.Rproj
Rplots.pdf
*.Rcheck
2 changes: 2 additions & 0 deletions .gitignore
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Expand Up @@ -3,3 +3,5 @@
.RData
.Ruserdata
PolySTest.Rproj
/artifacts/
*.Rcheck/
10 changes: 8 additions & 2 deletions DESCRIPTION
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Expand Up @@ -24,7 +24,7 @@ Imports:
limma (>= 3.61.3),
matrixStats (>= 0.57.0),
qvalue (>= 2.22.0),
shiny (>= 1.5.0),
shiny (>= 1.8.1),
SummarizedExperiment (>= 1.20.0),
knitr (>= 1.33),
plotly (>= 4.9.4),
Expand All @@ -34,13 +34,19 @@ Imports:
gplots (>= 3.1.1),
S4Vectors (>= 0.30.0),
parallel (>= 4.1.0),
methods (>= 4.1.0),
grDevices (>= 4.1.0),
graphics (>= 4.1.0),
stats (>= 4.1.0),
utils (>= 4.1.0)
Suggests:
testthat (>= 3.0.0),
BiocStyle
BiocStyle,
mirai,
missBayes,
promises,
rjags
Config/PolySTest/missBayes-commit: cd283693a16336d49e49a4132acc05822f92b2d6
VignetteBuilder:
knitr
Config/testthat/edition: 3
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