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  • Oxford Nanopore Technologies

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  1. nanoporetech/medaka nanoporetech/medaka Public

    Sequence correction provided by ONT Research

    Python 517 90

  2. epi2me-labs/wf-single-cell epi2me-labs/wf-single-cell Public

    Python 111 53

  3. yangao07/longcallD yangao07/longcallD Public

    LongcallD: joint calling and phasing of small, structural and mosaic variants from long reads

    C 105 7

  4. epi2me-labs/fastcat epi2me-labs/fastcat Public

    fastcat is a single executable with subcommands for FASTQ and BAM summary/statistics workflows. It was originally written to santize and concatenate .fastq(.gz) files, hence the name.

    C 55 4

  5. epi2me-labs/modbam2bed epi2me-labs/modbam2bed Public

    C 53 9

  6. nanoporetech/pyspoa nanoporetech/pyspoa Public

    Python bindings to spoa

    Python 22 4