Skip to content

dnaseq Experiment#83

Open
jbrestel wants to merge 1 commit intomasterfrom
dnaseq-reflow
Open

dnaseq Experiment#83
jbrestel wants to merge 1 commit intomasterfrom
dnaseq-reflow

Conversation

@jbrestel
Copy link
Copy Markdown
Member

@jbrestel jbrestel commented Apr 5, 2026

Replaces dnaSeqExperimentFromAccession and dnaSeqExperimentFromLocal with a single dnaseqExperiment datasetTemplate modeled after longReadRnaSeqExperiment. Adds snpAndCnvDNASeq.xml workflow (processSingleExperiment + loadSingleExperiment via dnaseq-nextflow), MakeDnaSeqNextflowConfig.pm, and MakeDnaSeqLoadNextflowConfig.pm.

Replaces dnaSeqExperimentFromAccession and dnaSeqExperimentFromLocal with
a single dnaseqExperiment datasetTemplate modeled after longReadRnaSeqExperiment.
Adds snpAndCnvDNASeq.xml workflow (processSingleExperiment + loadSingleExperiment
via dnaseq-nextflow), MakeDnaSeqNextflowConfig.pm, and MakeDnaSeqLoadNextflowConfig.pm.

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

1 participant