DIP based MRI parameter mapping

Code repository for “Paper Name” (DOI: 10.xxx/xxxxx)

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Installation

Follow these steps to install project dependencies using pip and a requirements.txt file:

1. Clone the repository & navigate to the project directory

   git clone https://github.com/MaxHellstrom/dip_parameter_mapping.git
   cd dip_parameter_mapping

2. Install dependencies

   pip install -r requirements.txt

3. Install PyTorch for your system
   https://pytorch.org/get-started/locally/

Example usage

1. Parse data

   by running the cells in the data/parsing/parse_t1_synthetic.ipynb

2. Run denoiser

   Run run_denoiser_t1_synthetic.py and observe output in the selected results folder

3. Evaluate results

   Run eval_results/plot_results_vs_references.ipynb and compare results with reference methods