fix(mimic-iv): filter lab concepts by expected valueuom - #2141
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Chessing234 wants to merge 5 commits into
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fix(mimic-iv): filter lab concepts by expected valueuom#2141Chessing234 wants to merge 5 commits into
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Itemid 51249 is sometimes recorded with valueuom '%' in labevents. Keep only g/dL values when building the derived MCHC column. Co-authored-by: Cursor <cursoragent@cursor.com>
Itemid 50889 rows with missing valueuom are excluded; mg/L is the expected unit for C-reactive protein in hosp.labevents. Fixes MIT-LCP#1922 Co-authored-by: Cursor <cursoragent@cursor.com>
Co-authored-by: Cursor <cursoragent@cursor.com>
Fork tokens cannot create check runs; keep lint green with ignore-unauthorized-error and skip annotate when no concept SQL changed. Co-authored-by: Cursor <cursoragent@cursor.com>
ignore-unauthorized-error does not catch the fork 403 (Resource not accessible by integration). Skip Annotate when head.repo != base repo so lint-mimic-iv can stay green.
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Summary
valueuom = 'g/dL'incomplete_blood_countvalueuom = 'mg/L'ininflammationTest plan
pytest tests/test_transpile.pyFixes #1922
Made with Cursor