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dependabot/uv/python-41c71026dd

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Updates the requirements on idc-index, fastapi, uvicorn[standard] and ruff to permit the latest version.
Updates idc-index from 0.12.4 to 0.12.5

Release notes

Sourced from idc-index's releases.

0.12.5

What's Changed

Full Changelog: ImagingDataCommons/idc-index@0.12.4...0.12.5

Commits
  • d5399f5 Merge pull request #286 from fedorov/relax-pandas
  • 1a7b42a fix: repair get_series_size lookup and instance URL construction
  • 7bef6dc build(deps): relax pandas constraint to >=2.2.2,<4
  • 5f86cac Merge pull request #285 from ImagingDataCommons/dependabot/github_actions/act...
  • 01b90dc enh: relax constraints on pandas version
  • 7e9a0ef build(deps): bump actions/setup-python from 6 to 7 in the actions group
  • See full diff in compare view

Updates fastapi from 0.140.13 to 0.141.1

Release notes

Sourced from fastapi's releases.

0.141.1

Fixes

  • 🐛 Fix support for background tasks and headers from dependencies in app.frontend(). PR #16105 by @​tiangolo.

Docs

0.141.0

Features

  • ✨ Add app.frontend(check_dir="auto"), to make local development more convenient with fastapi dev. PR #16102 by @​tiangolo.
Commits
  • 95f8322 🔖 Release version 0.141.1 (#16106)
  • f137944 📝 Update release notes
  • d623544 🐛 Fix support for background tasks and headers from dependencies in `app.fron...
  • 1d211b9 📝 Update release notes
  • 8a1f876 📝 Document FASTAPI_ENV in FastAPI CLI guide (#16104)
  • c7e7b65 🔖 Release version 0.141.0 (#16103)
  • 6bceb84 📝 Update release notes
  • 5429fed ✨ Add app.frontend(check_dir="auto"), to make local development more conven...
  • See full diff in compare view

Updates uvicorn[standard] to 0.52.1

Release notes

Sourced from uvicorn[standard]'s releases.

Version 0.52.1

Fixed

  • Complete the closing handshake on server-initiated WebSocket closes in the websockets-sansio and wsproto implementations, waiting for the client's close reply with a 10 second timeout instead of resetting the connection (#3053)
  • Add missing write flow control to the websockets-sansio implementation, preventing data truncation on server-initiated closes with large in-flight payloads (#3048)
  • Handle connection loss while a WebSocket write is waiting on backpressure (#3050)
  • Remove duplicate Content-Type and Content-Length headers from WebSocket denial responses on the websockets-sansio implementation, and deliver non-UTF-8 denial bodies intact (#3041)

Full Changelog: Kludex/uvicorn@0.52.0...0.52.1

Changelog

Sourced from uvicorn[standard]'s changelog.

0.52.1 (August 1, 2026)

Fixed

  • Complete the closing handshake on server-initiated WebSocket closes in the websockets-sansio and wsproto implementations, waiting for the client's close reply with a 10 second timeout instead of resetting the connection (#3053)
  • Add missing write flow control to the websockets-sansio implementation, preventing data truncation on server-initiated closes with large in-flight payloads (#3048)
  • Handle connection loss while a WebSocket write is waiting on backpressure (#3050)
  • Remove duplicate Content-Type and Content-Length headers from WebSocket denial responses on the websockets-sansio implementation, and deliver non-UTF-8 denial bodies intact (#3041)

0.52.0 (July 29, 2026)

This release adds an experimental HTTP/1.1 implementation backed by zttp, a sans-IO HTTP parser I've been developing on the side: a core written in Zig, with bindings to Python. It has been running under a fuzzer for some weeks now, and has been through multiple rounds of security auditing.

It is still experimental, so don't put it in front of production traffic yet. Try it with --http zttp, and please send any feedback to the issue tracker.

Added

  • Add an experimental zttp HTTP/1.1 implementation, selectable with --http zttp (#2979)

Fixed

  • Keep non-ASCII WebSocket request headers intact with websockets 17.0, which encodes them with ISO-8859-1 (#3036)

0.51.0 (July 8, 2026)

Added

  • Restart workers one at a time on SIGHUP, bringing each replacement up before retiring the old worker, so reloads no longer drop requests (#3025)

Removed

  • Remove colorama from the standard extra (#3027)

0.50.2 (July 6, 2026)

Fixed

  • Require websockets>=13.0, which the default websockets-sansio implementation needs (#3021)

0.50.1 (July 6, 2026)

Fixed

  • Split comma-separated Sec-WebSocket-Protocol values in the websockets-sansio implementation (#3019)

0.50.0 (July 4, 2026)

If you use WebSockets, note that --ws auto now picks the websockets-sansio implementation. You shouldn't need it, but you can pin --ws websockets to get the deprecated legacy one back.

Changed

... (truncated)

Commits
  • ee8e45c Version 0.52.1 (#3056)
  • b57926d Remove duplicate content headers from WebSocket denial responses on websocket...
  • 49de1b9 chore(deps): bump pymdown-extensions from 10.21.3 to 11.0 (#3042)
  • 2f3fa3a Complete server-initiated closes in SansIO WebSocket protocols (#3053)
  • 8c59d55 chore(deps): bump the github-actions group with 5 updates (#3054)
  • e148451 Handle connection loss during WebSocket write backpressure (#3050)
  • e16a69b Add missing write flow control to websockets-sansio (#3048)
  • ef1dd44 Fold the zttp-only tests back into the HTTP test suite (#3046)
  • 8f1b884 Version 0.52.0 (#3044)
  • f6833db Add experimental zttp HTTP/1.1 protocol (#2979)
  • Additional commits viewable in compare view

Updates ruff from 0.16.0 to 0.16.1

Release notes

Sourced from ruff's releases.

0.16.1

Release Notes

Released on 2026-07-30.

Preview features

  • Add an option to opt out of human-readable names (#27160)
  • [flake8-pytest-style] Make fixes safe by default and unsafe only when comments are present (PT018) (#27201)
  • [pyupgrade] Skip fix when a defaulted TypeVar precedes a non-defaulted one (UP040, UP046, UP047) (#27133)
  • [ruff] Fix false positive with unpacked arguments (RUF065) (#26959)

Bug fixes

  • Bump gen-lsp-types to gracefully handle unknown enumeration values in LSP messages (#27230)
  • [flake8-bugbear] Mark range as immutable (B008) (#27247)
  • [flake8-comprehensions] NFKC-normalize keyword names in C408 fix (#26813)
  • [flake8-return] Fix false positive when variable is read in finally clause (RET504) (#25441)
  • [pydocstyle] Skip section detection inside RST directive bodies (D214, D405, D413) (#23635)
  • [refurb] Parenthesize yield arguments in the FURB192 fix (#27192)

Rule changes

  • [flake8-pytest-style] Mark PT022 fixes as unsafe (#26440)
  • [refurb] Mark fixes that remove unknown separators as unsafe (FURB105) (#27200)

Server

  • Fix indexing of excluded nested Ruff workspaces (#27303)
  • Lint TOML files in the LSP (#26862)

Documentation

  • Cover pycon Markdown formatting (#27153)
  • [flake8-bandit] Document TYPE_CHECKING exception (S101) (#27004)
  • [flake8-import-conventions] Document that extend-aliases can override default aliases (#27191)
  • [pylint] Add missing fix safety gotchas for non-augmented-assignment (PLR6104) (#27250)

Other changes

  • Reduce syntax error noise by swallowing dedents like indents (#27170)
  • Vendor latest annotate-snippets (#27033)

Contributors

... (truncated)

Changelog

Sourced from ruff's changelog.

0.16.1

Released on 2026-07-30.

Preview features

  • Add an option to opt out of human-readable names (#27160)
  • [flake8-pytest-style] Make fixes safe by default and unsafe only when comments are present (PT018) (#27201)
  • [pyupgrade] Skip fix when a defaulted TypeVar precedes a non-defaulted one (UP040, UP046, UP047) (#27133)
  • [ruff] Fix false positive with unpacked arguments (RUF065) (#26959)

Bug fixes

  • Bump gen-lsp-types to gracefully handle unknown enumeration values in LSP messages (#27230)
  • [flake8-bugbear] Mark range as immutable (B008) (#27247)
  • [flake8-comprehensions] NFKC-normalize keyword names in C408 fix (#26813)
  • [flake8-return] Fix false positive when variable is read in finally clause (RET504) (#25441)
  • [pydocstyle] Skip section detection inside RST directive bodies (D214, D405, D413) (#23635)
  • [refurb] Parenthesize yield arguments in the FURB192 fix (#27192)

Rule changes

  • [flake8-pytest-style] Mark PT022 fixes as unsafe (#26440)
  • [refurb] Mark fixes that remove unknown separators as unsafe (FURB105) (#27200)

Server

  • Fix indexing of excluded nested Ruff workspaces (#27303)
  • Lint TOML files in the LSP (#26862)

Documentation

  • Cover pycon Markdown formatting (#27153)
  • [flake8-bandit] Document TYPE_CHECKING exception (S101) (#27004)
  • [flake8-import-conventions] Document that extend-aliases can override default aliases (#27191)
  • [pylint] Add missing fix safety gotchas for non-augmented-assignment (PLR6104) (#27250)

Other changes

  • Reduce syntax error noise by swallowing dedents like indents (#27170)
  • Vendor latest annotate-snippets (#27033)

Contributors

... (truncated)

Commits
  • 80790b3 Bump 0.16.1 (#27330)
  • 63830f3 [ty] Borrow from constraint set storage less often (#27328)
  • f40dca9 [ty] Preserve forwarded expanded-variadic diagnostic sources (#27266)
  • 0d80497 Lint TOML files in the LSP (#26862)
  • d91586b Update prek dependencies (#27293)
  • 7da4b8b [ty] Respect bounds and constraints in generic materializations (#27228)
  • b20daf7 [ty] refactor: add helper function to send partial results (#27249)
  • 4d4c8fa [ty] Emit diagnostic when specializing a non-generic class (#26883)
  • 7c3e2db [ty] Fix enum class container assignability (#27318)
  • d5ef97f [flake8-return] Fix false positive when variable is read in finally claus...
  • Additional commits viewable in compare view

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@dependabot
build(deps): Bump the python group with 4 updates
6905048 
Updates the requirements on [idc-index](https://github.com/ImagingDataCommons/idc-index), [fastapi](https://github.com/fastapi/fastapi), [uvicorn[standard]](https://github.com/Kludex/uvicorn) and [ruff](https://github.com/astral-sh/ruff) to permit the latest version.

Updates `idc-index` from 0.12.4 to 0.12.5
- [Release notes](https://github.com/ImagingDataCommons/idc-index/releases)
- [Commits](ImagingDataCommons/idc-index@0.12.4...0.12.5)

Updates `fastapi` from 0.140.13 to 0.141.1
- [Release notes](https://github.com/fastapi/fastapi/releases)
- [Commits](fastapi/fastapi@0.140.13...0.141.1)

Updates `uvicorn[standard]` to 0.52.1
- [Release notes](https://github.com/Kludex/uvicorn/releases)
- [Changelog](https://github.com/Kludex/uvicorn/blob/main/docs/release-notes.md)
- [Commits](Kludex/uvicorn@0.51.0...0.52.1)

Updates `ruff` from 0.16.0 to 0.16.1
- [Release notes](https://github.com/astral-sh/ruff/releases)
- [Changelog](https://github.com/astral-sh/ruff/blob/main/CHANGELOG.md)
- [Commits](astral-sh/ruff@0.16.0...0.16.1)

---
updated-dependencies:
- dependency-name: idc-index
  dependency-version: 0.12.5
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: python
- dependency-name: fastapi
  dependency-version: 0.141.1
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: python
- dependency-name: uvicorn[standard]
  dependency-version: 0.52.1
  dependency-type: direct:production
  dependency-group: python
- dependency-name: ruff
  dependency-version: 0.16.1
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: python
...

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@dependabot dependabot Bot added dependencies Pull requests that update a dependency file python:uv Pull requests that update python:uv code labels Aug 6, 2026
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