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@FunctionLab

Troyanskaya Laboratory

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  1. onboarding onboarding Public

    Information for new Troyanskaya lab members

    5 1

  2. function function Public

    Python library for functional genomics

    Python 4 4

  3. selene selene Public

    a framework for training sequence-level deep learning networks

    Jupyter Notebook 403 91

  4. ExPecto ExPecto Public

    predicting expression effects of human genome variants ab initio from sequence

    Python 138 40

  5. sleipnir sleipnir Public

    C++ 4 1

Repositories

Showing 10 of 33 repositories
  • DaVinci Public

    Deconvolving lAtent Variables for Integrated Niche Cluster Identification

    FunctionLab/DaVinci's past year of commit activity
    R 1 1 0 0 Updated Sep 11, 2026
  • Seal Public

    Sequence-to-expression transfer learning framework for context-specific prediction of variant effects on expression

    FunctionLab/Seal's past year of commit activity
    Python 2 0 0 0 Updated Aug 14, 2026
  • protea Public
    FunctionLab/protea's past year of commit activity
    Python 0 0 0 0 Updated Aug 12, 2026
  • wreath-manuscript Public

    Code for reproducing the Wreath manuscript results

    FunctionLab/wreath-manuscript's past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Aug 3, 2026
  • wreath-framework Public

    code to run the Wreath methylation sequence model ML framework: training, evaluation, and prediction

    FunctionLab/wreath-framework's past year of commit activity
    Python 2 0 0 0 Updated Aug 3, 2026
  • tapioca Public

    a framework for predicting global protein-protein interaction networks from dynamic mass spec data

    FunctionLab/tapioca's past year of commit activity
    Python 25 BSD-3-Clause-Clear 2 1 1 Updated Jul 29, 2026
  • DIS Public

    Interpretable DIS+ AI framework for disease-specific variant pathogenicity

    FunctionLab/DIS's past year of commit activity
    Python 1 0 0 0 Updated Jun 17, 2026
  • humanbase-docs Public Forked from readthedocs/template

    A template Sphinx repo

    FunctionLab/humanbase-docs's past year of commit activity
    2 1,198 0 2 Updated Jun 8, 2026
  • mahi Public

    AI framework for in silico genetic perturbation in tissue & cell-type context.

    FunctionLab/mahi's past year of commit activity
    Python 3 0 0 0 Updated May 26, 2026
  • DaVinci-docs Public
    FunctionLab/DaVinci-docs's past year of commit activity
    0 0 0 0 Updated Mar 7, 2026
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