{2025.06}[GCC/14.3.0] BEDTools 2.31.1 by jpecar · Pull Request #1595 · EESSI/software-layer

jpecar · 2026-08-31T13:28:02Z

Our local CI is now fully functional, we're now starting with build efforts. This is first small one.

bedroge · 2026-08-31T13:38:33Z

bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=x86_64/amd/zen2
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-aws-eu-south for:arch=x86_64/amd/zen5
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-deucalion for:arch=aarch64/a64fx
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-jsc for:arch=aarch64/nvidia/grace

eessi-bot-aws · 2026-08-31T13:38:42Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: amd-zen2
Building for: x86_64/amd/zen2
Job dir: /project/def-users/SHARED/jobs/2026.08/pr_1595/191844

date	job status	comment
Aug 31 13:38:40 UTC 2026	submitted	job id `191844` awaits release by job manager
Aug 31 13:38:55 UTC 2026	released	job awaits launch by Slurm scheduler
Aug 31 13:48:37 UTC 2026	running	job `191844` is running
Aug 31 14:02:46 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-191844.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-x86_64-amd-zen2-17881846150.tar.zst` size: 36 MiB (38292515 bytes) entries: 811 modules under 2025.06/software/linux/x86_64/amd/zen2/modules/all `BamTools/2.5.3-GCC-14.3.0.lua` `BEDTools/2.31.1-GCC-14.3.0.lua` `JsonCpp/1.9.6-GCCcore-14.3.0.lua` software under 2025.06/software/linux/x86_64/amd/zen2/software `BamTools/2.5.3-GCC-14.3.0` `BEDTools/2.31.1-GCC-14.3.0` `JsonCpp/1.9.6-GCCcore-14.3.0` reprod directories under 2025.06/software/linux/x86_64/amd/zen2/reprod `BamTools/2.5.3-GCC-14.3.0/20260831_135457UTC` `BEDTools/2.31.1-GCC-14.3.0/20260831_135625UTC` `JsonCpp/1.9.6-GCCcore-14.3.0/20260831_135411UTC` other under 2025.06/software/linux/x86_64/amd/zen2 no other files in tarball
Aug 31 14:02:46 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025-foss-2024a-kokkos %scale=1_node /ade8cad7 @BotBuildTests:x86-64-zen2+default P: perf: 442.169 timesteps/s (r:0, l:None, u:None) [ OK ] (2/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025_update4-foss-2025b-kokkos %scale=1_node /e121eb9c @BotBuildTests:x86-64-zen2+default P: perf: 448.289 timesteps/s (r:0, l:None, u:None) [ OK ] (3/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:x86-64-zen2+default P: latency: 1.37 us (r:0, l:None, u:None) [ OK ] (4/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:x86-64-zen2+default P: latency: 2.04 us (r:0, l:None, u:None) [ OK ] (5/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:x86-64-zen2+default P: latency: 0.18 us (r:0, l:None, u:None) [ OK ] (6/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:x86-64-zen2+default P: bandwidth: 7794.36 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 6/6 test case(s) from 6 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-191844.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Aug 31 15:00:20 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-x86_64-amd-zen2-17881846150.tar.zst` to S3 bucket succeeded

eessi-bot-deucalion · 2026-08-31T13:38:44Z

New job on instance eessi-bot-deucalion for repository eessi.io-2025.06-software
Building on: a64fx
Building for: aarch64/a64fx
Job dir: /home/eessibot/new-bot/jobs/2026.08/pr_1595/1861398

date	job status	comment
Aug 31 13:38:42 UTC 2026	submitted	job id `1861398` awaits release by job manager
Aug 31 13:39:40 UTC 2026	released	job awaits launch by Slurm scheduler
Aug 31 13:40:43 UTC 2026	running	job `1861398` is running
Aug 31 13:58:15 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-1861398.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-aarch64-a64fx-17881842020.tar.zst` size: 35 MiB (37394048 bytes) entries: 811 modules under 2025.06/software/linux/aarch64/a64fx/modules/all `BEDTools/2.31.1-GCC-14.3.0.lua` `BamTools/2.5.3-GCC-14.3.0.lua` `JsonCpp/1.9.6-GCCcore-14.3.0.lua` software under 2025.06/software/linux/aarch64/a64fx/software `BEDTools/2.31.1-GCC-14.3.0` `BamTools/2.5.3-GCC-14.3.0` `JsonCpp/1.9.6-GCCcore-14.3.0` reprod directories under 2025.06/software/linux/aarch64/a64fx/reprod `BEDTools/2.31.1-GCC-14.3.0/20260831_134904UTC` `BamTools/2.5.3-GCC-14.3.0/20260831_134635UTC` `JsonCpp/1.9.6-GCCcore-14.3.0/20260831_134506UTC` other under 2025.06/software/linux/aarch64/a64fx no other files in tarball
Aug 31 13:58:15 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ SKIP ] (1/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:a64fx+default [Skipping test: nodes in this partition only have 30720 MiB memory available (per node) according to the current ReFrame configuration, but 49152 MiB is needed] [ SKIP ] (2/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:a64fx+default [Skipping test: nodes in this partition only have 30720 MiB memory available (per node) according to the current ReFrame configuration, but 49152 MiB is needed] [ OK ] (3/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:a64fx+default P: latency: 0.92 us (r:0, l:None, u:None) [ OK ] (4/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:a64fx+default P: bandwidth: 8189.32 MB/s (r:0, l:None, u:None) [ OK ] (5/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025-foss-2024a-kokkos %scale=1_node /ade8cad7 @BotBuildTests:a64fx+default P: perf: 488.227 timesteps/s (r:0, l:None, u:None) [ OK ] (6/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025_update4-foss-2025b-kokkos %scale=1_node /e121eb9c @BotBuildTests:a64fx+default P: perf: 532.166 timesteps/s (r:0, l:None, u:None) [ PASSED ] Ran 4/6 test case(s) from 6 check(s) (0 failure(s), 2 skipped, 0 aborted) Details ✅ job output file `slurm-1861398.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Aug 31 15:00:21 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-aarch64-a64fx-17881842020.tar.zst` to S3 bucket succeeded

eessi-bot-aws-eu-south · 2026-08-31T13:38:44Z

New job on instance eessi-bot-aws-eu-south for repository eessi.io-2025.06-software
Building on: amd-zen5
Building for: x86_64/amd/zen5
Job dir: /project/def-users/SHARED/jobs/2026.08/pr_1595/302

date	job status	comment
Aug 31 13:38:42 UTC 2026	submitted	job id `302` awaits release by job manager
Aug 31 13:39:49 UTC 2026	released	job awaits launch by Slurm scheduler
Aug 31 13:46:23 UTC 2026	running	job `302` is running
Aug 31 13:54:19 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-302.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-x86_64-amd-zen5-17881843400.tar.zst` size: 36 MiB (38261318 bytes) entries: 811 modules under 2025.06/software/linux/x86_64/amd/zen5/modules/all `BamTools/2.5.3-GCC-14.3.0.lua` `BEDTools/2.31.1-GCC-14.3.0.lua` `JsonCpp/1.9.6-GCCcore-14.3.0.lua` software under 2025.06/software/linux/x86_64/amd/zen5/software `BamTools/2.5.3-GCC-14.3.0` `BEDTools/2.31.1-GCC-14.3.0` `JsonCpp/1.9.6-GCCcore-14.3.0` reprod directories under 2025.06/software/linux/x86_64/amd/zen5/reprod `BamTools/2.5.3-GCC-14.3.0/20260831_135125UTC` `BEDTools/2.31.1-GCC-14.3.0/20260831_135158UTC` `JsonCpp/1.9.6-GCCcore-14.3.0/20260831_135105UTC` other under 2025.06/software/linux/x86_64/amd/zen5 no other files in tarball
Aug 31 13:54:19 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025-foss-2024a-kokkos %scale=1_node /ade8cad7 @BotBuildTests:x86-64-zen5+default P: perf: 1563.256 timesteps/s (r:0, l:None, u:None) [ OK ] (2/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025_update4-foss-2025b-kokkos %scale=1_node /e121eb9c @BotBuildTests:x86-64-zen5+default P: perf: 1565.204 timesteps/s (r:0, l:None, u:None) [ OK ] (3/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:x86-64-zen5+default P: latency: 1.22 us (r:0, l:None, u:None) [ OK ] (4/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:x86-64-zen5+default P: latency: 2.84 us (r:0, l:None, u:None) [ OK ] (5/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:x86-64-zen5+default P: latency: 0.13 us (r:0, l:None, u:None) [ OK ] (6/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:x86-64-zen5+default P: bandwidth: 46193.87 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 6/6 test case(s) from 6 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-302.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Aug 31 15:00:21 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-x86_64-amd-zen5-17881843400.tar.zst` to S3 bucket succeeded

eessi-bot-jsc · 2026-08-31T13:39:10Z

New job on instance eessi-bot-jsc for repository eessi.io-2025.06-software
Building on: nvidia-grace
Building for: aarch64/nvidia/grace
Job dir: /p/project1/ceasybuilders/eessibot/jobs/2026.08/pr_1595/15576231

date	job status	comment
Aug 31 13:39:08 UTC 2026	submitted	job id `15576231` awaits release by job manager
Aug 31 13:39:52 UTC 2026	released	job awaits launch by Slurm scheduler
Aug 31 13:40:56 UTC 2026	running	job `15576231` is running
Aug 31 14:03:44 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-15576231.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-aarch64-nvidia-grace-17881840410.tar.gz` size: 35 MiB (37604155 bytes) entries: 811 modules under 2025.06/software/linux/aarch64/nvidia/grace/modules/all `BamTools/2.5.3-GCC-14.3.0.lua` `BEDTools/2.31.1-GCC-14.3.0.lua` `JsonCpp/1.9.6-GCCcore-14.3.0.lua` software under 2025.06/software/linux/aarch64/nvidia/grace/software `BamTools/2.5.3-GCC-14.3.0` `BEDTools/2.31.1-GCC-14.3.0` `JsonCpp/1.9.6-GCCcore-14.3.0` reprod directories under 2025.06/software/linux/aarch64/nvidia/grace/reprod `BamTools/2.5.3-GCC-14.3.0/20260831_134502UTC` `BEDTools/2.31.1-GCC-14.3.0/20260831_134627UTC` `JsonCpp/1.9.6-GCCcore-14.3.0/20260831_134443UTC` other under 2025.06/software/linux/aarch64/nvidia/grace no other files in tarball
Aug 31 14:03:45 UTC 2026	test result	😢 FAILURE (click triangle for details) Reason EESSI test suite produced failures. ReFrame Summary [ FAILED ] Ran 18/30 test case(s) from 30 check(s) (4 failure(s), 12 skipped, 0 aborted) Details ✅ job output file `slurm-15576231.out` ❌ found message matching `ERROR:` ❌ found message matching `[\sFAILED\s].Ran . test case`
Aug 31 15:00:20 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-aarch64-nvidia-grace-17881840410.tar.gz` to S3 bucket succeeded

bedroge · 2026-08-31T14:13:12Z

bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=x86_64/amd/zen3
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=x86_64/amd/zen4
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=x86_64/intel/skylake_avx512
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=x86_64/intel/haswell
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=x86_64/intel/icelake
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=x86_64/intel/cascadelake
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=x86_64/intel/sapphirerapids
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=x86_64/generic
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=aarch64/generic
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=aarch64/neoverse_n1
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=aarch64/neoverse_v1

eessi-bot-aws · 2026-08-31T14:13:21Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: amd-zen3
Building for: x86_64/amd/zen3
Job dir: /project/def-users/SHARED/jobs/2026.08/pr_1595/191845

date	job status	comment
Aug 31 14:13:19 UTC 2026	submitted	job id `191845` awaits release by job manager
Aug 31 14:13:27 UTC 2026	released	job awaits launch by Slurm scheduler
Aug 31 14:18:24 UTC 2026	running	job `191845` is running
Aug 31 14:25:41 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-191845.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-x86_64-amd-zen3-17881860450.tar.zst` size: 36 MiB (38289040 bytes) entries: 811 modules under 2025.06/software/linux/x86_64/amd/zen3/modules/all `BamTools/2.5.3-GCC-14.3.0.lua` `BEDTools/2.31.1-GCC-14.3.0.lua` `JsonCpp/1.9.6-GCCcore-14.3.0.lua` software under 2025.06/software/linux/x86_64/amd/zen3/software `BamTools/2.5.3-GCC-14.3.0` `BEDTools/2.31.1-GCC-14.3.0` `JsonCpp/1.9.6-GCCcore-14.3.0` reprod directories under 2025.06/software/linux/x86_64/amd/zen3/reprod `BamTools/2.5.3-GCC-14.3.0/20260831_141932UTC` `BEDTools/2.31.1-GCC-14.3.0/20260831_142031UTC` `JsonCpp/1.9.6-GCCcore-14.3.0/20260831_141900UTC` other under 2025.06/software/linux/x86_64/amd/zen3 no other files in tarball
Aug 31 14:25:41 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025-foss-2024a-kokkos %scale=1_node /ade8cad7 @BotBuildTests:x86-64-zen3+default P: perf: 527.676 timesteps/s (r:0, l:None, u:None) [ OK ] (2/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025_update4-foss-2025b-kokkos %scale=1_node /e121eb9c @BotBuildTests:x86-64-zen3+default P: perf: 528.984 timesteps/s (r:0, l:None, u:None) [ OK ] (3/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:x86-64-zen3+default P: latency: 0.83 us (r:0, l:None, u:None) [ OK ] (4/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:x86-64-zen3+default P: latency: 1.12 us (r:0, l:None, u:None) [ OK ] (5/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:x86-64-zen3+default P: latency: 0.18 us (r:0, l:None, u:None) [ OK ] (6/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:x86-64-zen3+default P: bandwidth: 15037.87 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 6/6 test case(s) from 6 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-191845.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Aug 31 15:00:31 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-x86_64-amd-zen3-17881860450.tar.zst` to S3 bucket succeeded

eessi-bot-aws · 2026-08-31T14:13:26Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: amd-zen4
Building for: x86_64/amd/zen4
Job dir: /project/def-users/SHARED/jobs/2026.08/pr_1595/191846

date	job status	comment
Aug 31 14:13:25 UTC 2026	submitted	job id `191846` awaits release by job manager
Aug 31 14:13:30 UTC 2026	released	job awaits launch by Slurm scheduler
Aug 31 14:19:33 UTC 2026	running	job `191846` is running
Aug 31 14:30:45 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-191846.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-x86_64-amd-zen4-17881863550.tar.zst` size: 36 MiB (38269472 bytes) entries: 811 modules under 2025.06/software/linux/x86_64/amd/zen4/modules/all `BamTools/2.5.3-GCC-14.3.0.lua` `BEDTools/2.31.1-GCC-14.3.0.lua` `JsonCpp/1.9.6-GCCcore-14.3.0.lua` software under 2025.06/software/linux/x86_64/amd/zen4/software `BamTools/2.5.3-GCC-14.3.0` `BEDTools/2.31.1-GCC-14.3.0` `JsonCpp/1.9.6-GCCcore-14.3.0` reprod directories under 2025.06/software/linux/x86_64/amd/zen4/reprod `BamTools/2.5.3-GCC-14.3.0/20260831_142441UTC` `BEDTools/2.31.1-GCC-14.3.0/20260831_142531UTC` `JsonCpp/1.9.6-GCCcore-14.3.0/20260831_142411UTC` other under 2025.06/software/linux/x86_64/amd/zen4 no other files in tarball
Aug 31 14:30:45 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025-foss-2024a-kokkos %scale=1_node /ade8cad7 @BotBuildTests:x86-64-zen4+default P: perf: 1163.374 timesteps/s (r:0, l:None, u:None) [ OK ] (2/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025_update4-foss-2025b-kokkos %scale=1_node /e121eb9c @BotBuildTests:x86-64-zen4+default P: perf: 1165.056 timesteps/s (r:0, l:None, u:None) [ OK ] (3/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:x86-64-zen4+default P: latency: 1.43 us (r:0, l:None, u:None) [ OK ] (4/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:x86-64-zen4+default P: latency: 3.21 us (r:0, l:None, u:None) [ OK ] (5/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:x86-64-zen4+default P: latency: 0.16 us (r:0, l:None, u:None) [ OK ] (6/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:x86-64-zen4+default P: bandwidth: 14204.3 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 6/6 test case(s) from 6 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-191846.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Aug 31 15:00:41 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-x86_64-amd-zen4-17881863550.tar.zst` to S3 bucket succeeded

eessi-bot-aws · 2026-08-31T14:13:32Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: intel-skylake_avx512
Building for: x86_64/intel/skylake_avx512
Job dir: /project/def-users/SHARED/jobs/2026.08/pr_1595/191847

date	job status	comment
Aug 31 14:13:31 UTC 2026	submitted	job id `191847` awaits release by job manager
Aug 31 14:14:58 UTC 2026	released	job awaits launch by Slurm scheduler
Aug 31 14:28:10 UTC 2026	running	job `191847` is running
Aug 31 14:40:00 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-191847.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-x86_64-intel-skylake_avx512-17881868650.tar.zst` size: 36 MiB (38201519 bytes) entries: 811 modules under 2025.06/software/linux/x86_64/intel/skylake_avx512/modules/all `BamTools/2.5.3-GCC-14.3.0.lua` `BEDTools/2.31.1-GCC-14.3.0.lua` `JsonCpp/1.9.6-GCCcore-14.3.0.lua` software under 2025.06/software/linux/x86_64/intel/skylake_avx512/software `BamTools/2.5.3-GCC-14.3.0` `BEDTools/2.31.1-GCC-14.3.0` `JsonCpp/1.9.6-GCCcore-14.3.0` reprod directories under 2025.06/software/linux/x86_64/intel/skylake_avx512/reprod `BamTools/2.5.3-GCC-14.3.0/20260831_143253UTC` `BEDTools/2.31.1-GCC-14.3.0/20260831_143357UTC` `JsonCpp/1.9.6-GCCcore-14.3.0/20260831_143218UTC` other under 2025.06/software/linux/x86_64/intel/skylake_avx512 no other files in tarball
Aug 31 14:40:00 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025-foss-2024a-kokkos %scale=1_node /ade8cad7 @BotBuildTests:x86-64-skylake+default P: perf: 431.682 timesteps/s (r:0, l:None, u:None) [ OK ] (2/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025_update4-foss-2025b-kokkos %scale=1_node /e121eb9c @BotBuildTests:x86-64-skylake+default P: perf: 442.44 timesteps/s (r:0, l:None, u:None) [ OK ] (3/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:x86-64-skylake+default P: latency: 1.17 us (r:0, l:None, u:None) [ OK ] (4/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:x86-64-skylake+default P: latency: 1.67 us (r:0, l:None, u:None) [ OK ] (5/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:x86-64-skylake+default P: latency: 0.24 us (r:0, l:None, u:None) [ OK ] (6/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:x86-64-skylake+default P: bandwidth: 10815.52 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 6/6 test case(s) from 6 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-191847.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Aug 31 15:00:51 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-x86_64-intel-skylake_avx512-17881868650.tar.zst` to S3 bucket succeeded

eessi-bot-aws · 2026-08-31T14:13:38Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: intel-haswell
Building for: x86_64/intel/haswell
Job dir: /project/def-users/SHARED/jobs/2026.08/pr_1595/191848

date	job status	comment
Aug 31 14:13:36 UTC 2026	submitted	job id `191848` awaits release by job manager
Aug 31 14:14:52 UTC 2026	released	job awaits launch by Slurm scheduler
Aug 31 14:25:34 UTC 2026	running	job `191848` is running
Aug 31 14:33:13 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-191848.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-x86_64-intel-haswell-17881864420.tar.zst` size: 36 MiB (38240450 bytes) entries: 811 modules under 2025.06/software/linux/x86_64/intel/haswell/modules/all `BamTools/2.5.3-GCC-14.3.0.lua` `BEDTools/2.31.1-GCC-14.3.0.lua` `JsonCpp/1.9.6-GCCcore-14.3.0.lua` software under 2025.06/software/linux/x86_64/intel/haswell/software `BamTools/2.5.3-GCC-14.3.0` `BEDTools/2.31.1-GCC-14.3.0` `JsonCpp/1.9.6-GCCcore-14.3.0` reprod directories under 2025.06/software/linux/x86_64/intel/haswell/reprod `BamTools/2.5.3-GCC-14.3.0/20260831_142604UTC` `BEDTools/2.31.1-GCC-14.3.0/20260831_142707UTC` `JsonCpp/1.9.6-GCCcore-14.3.0/20260831_142532UTC` other under 2025.06/software/linux/x86_64/intel/haswell no other files in tarball
Aug 31 14:33:13 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025-foss-2024a-kokkos %scale=1_node /ade8cad7 @BotBuildTests:x86-64-haswell+default P: perf: 444.987 timesteps/s (r:0, l:None, u:None) [ OK ] (2/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025_update4-foss-2025b-kokkos %scale=1_node /e121eb9c @BotBuildTests:x86-64-haswell+default P: perf: 460.738 timesteps/s (r:0, l:None, u:None) [ OK ] (3/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:x86-64-haswell+default P: latency: 2.45 us (r:0, l:None, u:None) [ OK ] (4/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:x86-64-haswell+default P: latency: 2.21 us (r:0, l:None, u:None) [ OK ] (5/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:x86-64-haswell+default P: latency: 0.61 us (r:0, l:None, u:None) [ OK ] (6/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:x86-64-haswell+default P: bandwidth: 10556.83 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 6/6 test case(s) from 6 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-191848.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Aug 31 15:01:02 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-x86_64-intel-haswell-17881864420.tar.zst` to S3 bucket succeeded

eessi-bot-aws · 2026-08-31T14:13:44Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: intel-icelake
Building for: x86_64/intel/icelake
Job dir: /project/def-users/SHARED/jobs/2026.08/pr_1595/191849

date	job status	comment
Aug 31 14:13:42 UTC 2026	submitted	job id `191849` awaits release by job manager
Aug 31 14:14:55 UTC 2026	released	job awaits launch by Slurm scheduler
Aug 31 14:25:37 UTC 2026	running	job `191849` is running
Aug 31 14:33:15 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-191849.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-x86_64-intel-icelake-17881864610.tar.zst` size: 36 MiB (38248649 bytes) entries: 811 modules under 2025.06/software/linux/x86_64/intel/icelake/modules/all `BamTools/2.5.3-GCC-14.3.0.lua` `BEDTools/2.31.1-GCC-14.3.0.lua` `JsonCpp/1.9.6-GCCcore-14.3.0.lua` software under 2025.06/software/linux/x86_64/intel/icelake/software `BamTools/2.5.3-GCC-14.3.0` `BEDTools/2.31.1-GCC-14.3.0` `JsonCpp/1.9.6-GCCcore-14.3.0` reprod directories under 2025.06/software/linux/x86_64/intel/icelake/reprod `BamTools/2.5.3-GCC-14.3.0/20260831_142642UTC` `BEDTools/2.31.1-GCC-14.3.0/20260831_142729UTC` `JsonCpp/1.9.6-GCCcore-14.3.0/20260831_142617UTC` other under 2025.06/software/linux/x86_64/intel/icelake no other files in tarball
Aug 31 14:33:15 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025-foss-2024a-kokkos %scale=1_node /ade8cad7 @BotBuildTests:x86-64-icelake+default P: perf: 541.755 timesteps/s (r:0, l:None, u:None) [ OK ] (2/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025_update4-foss-2025b-kokkos %scale=1_node /e121eb9c @BotBuildTests:x86-64-icelake+default P: perf: 551.466 timesteps/s (r:0, l:None, u:None) [ OK ] (3/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:x86-64-icelake+default P: latency: 1.03 us (r:0, l:None, u:None) [ OK ] (4/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:x86-64-icelake+default P: latency: 1.52 us (r:0, l:None, u:None) [ OK ] (5/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:x86-64-icelake+default P: latency: 0.23 us (r:0, l:None, u:None) [ OK ] (6/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:x86-64-icelake+default P: bandwidth: 12796.5 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 6/6 test case(s) from 6 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-191849.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Aug 31 15:01:12 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-x86_64-intel-icelake-17881864610.tar.zst` to S3 bucket succeeded

eessi-bot-aws · 2026-08-31T14:13:50Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: intel-cascadelake
Building for: x86_64/intel/cascadelake
Job dir: /project/def-users/SHARED/jobs/2026.08/pr_1595/191850

date	job status	comment
Aug 31 14:13:48 UTC 2026	submitted	job id `191850` awaits release by job manager
Aug 31 14:14:49 UTC 2026	released	job awaits launch by Slurm scheduler
Aug 31 14:24:22 UTC 2026	running	job `191850` is running
Aug 31 14:33:11 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-191850.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-x86_64-intel-cascadelake-17881866620.tar.zst` size: 36 MiB (38233010 bytes) entries: 811 modules under 2025.06/software/linux/x86_64/intel/cascadelake/modules/all `BamTools/2.5.3-GCC-14.3.0.lua` `BEDTools/2.31.1-GCC-14.3.0.lua` `JsonCpp/1.9.6-GCCcore-14.3.0.lua` software under 2025.06/software/linux/x86_64/intel/cascadelake/software `BamTools/2.5.3-GCC-14.3.0` `BEDTools/2.31.1-GCC-14.3.0` `JsonCpp/1.9.6-GCCcore-14.3.0` reprod directories under 2025.06/software/linux/x86_64/intel/cascadelake/reprod `BamTools/2.5.3-GCC-14.3.0/20260831_142928UTC` `BEDTools/2.31.1-GCC-14.3.0/20260831_143033UTC` `JsonCpp/1.9.6-GCCcore-14.3.0/20260831_142852UTC` other under 2025.06/software/linux/x86_64/intel/cascadelake no other files in tarball
Aug 31 14:33:11 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025-foss-2024a-kokkos %scale=1_node /ade8cad7 @BotBuildTests:x86-64-cascadelake+default P: perf: 410.434 timesteps/s (r:0, l:None, u:None) [ OK ] (2/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025_update4-foss-2025b-kokkos %scale=1_node /e121eb9c @BotBuildTests:x86-64-cascadelake+default P: perf: 426.795 timesteps/s (r:0, l:None, u:None) [ OK ] (3/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:x86-64-cascadelake+default P: latency: 1.62 us (r:0, l:None, u:None) [ OK ] (4/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:x86-64-cascadelake+default P: latency: 2.33 us (r:0, l:None, u:None) [ OK ] (5/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:x86-64-cascadelake+default P: latency: 0.39 us (r:0, l:None, u:None) [ OK ] (6/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:x86-64-cascadelake+default P: bandwidth: 10213.87 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 6/6 test case(s) from 6 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-191850.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Aug 31 15:01:22 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-x86_64-intel-cascadelake-17881866620.tar.zst` to S3 bucket succeeded

eessi-bot-aws · 2026-08-31T14:13:55Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: intel-sapphirerapids
Building for: x86_64/intel/sapphirerapids
Job dir: /project/def-users/SHARED/jobs/2026.08/pr_1595/191851

date	job status	comment
Aug 31 14:13:54 UTC 2026	submitted	job id `191851` awaits release by job manager
Aug 31 14:15:00 UTC 2026	released	job awaits launch by Slurm scheduler
Aug 31 14:28:12 UTC 2026	running	job `191851` is running
Aug 31 14:38:54 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-191851.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-x86_64-intel-sapphirerapids-17881869510.tar.zst` size: 36 MiB (38202086 bytes) entries: 811 modules under 2025.06/software/linux/x86_64/intel/sapphirerapids/modules/all `BamTools/2.5.3-GCC-14.3.0.lua` `BEDTools/2.31.1-GCC-14.3.0.lua` `JsonCpp/1.9.6-GCCcore-14.3.0.lua` software under 2025.06/software/linux/x86_64/intel/sapphirerapids/software `BamTools/2.5.3-GCC-14.3.0` `BEDTools/2.31.1-GCC-14.3.0` `JsonCpp/1.9.6-GCCcore-14.3.0` reprod directories under 2025.06/software/linux/x86_64/intel/sapphirerapids/reprod `BamTools/2.5.3-GCC-14.3.0/20260831_143426UTC` `BEDTools/2.31.1-GCC-14.3.0/20260831_143523UTC` `JsonCpp/1.9.6-GCCcore-14.3.0/20260831_143331UTC` other under 2025.06/software/linux/x86_64/intel/sapphirerapids no other files in tarball
Aug 31 14:38:54 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025-foss-2024a-kokkos %scale=1_node /ade8cad7 @BotBuildTests:x86-64-sapphirerapids+default P: perf: 579.14 timesteps/s (r:0, l:None, u:None) [ OK ] (2/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025_update4-foss-2025b-kokkos %scale=1_node /e121eb9c @BotBuildTests:x86-64-sapphirerapids+default P: perf: 600.4 timesteps/s (r:0, l:None, u:None) [ OK ] (3/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:x86-64-sapphirerapids+default P: latency: 1.48 us (r:0, l:None, u:None) [ OK ] (4/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:x86-64-sapphirerapids+default P: latency: 1.56 us (r:0, l:None, u:None) [ OK ] (5/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:x86-64-sapphirerapids+default P: latency: 0.3 us (r:0, l:None, u:None) [ OK ] (6/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:x86-64-sapphirerapids+default P: bandwidth: 13246.12 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 6/6 test case(s) from 6 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-191851.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Aug 31 15:01:32 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-x86_64-intel-sapphirerapids-17881869510.tar.zst` to S3 bucket succeeded

eessi-bot-aws · 2026-08-31T14:14:01Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: generic
Building for: x86_64/generic
Job dir: /project/def-users/SHARED/jobs/2026.08/pr_1595/191852

date	job status	comment
Aug 31 14:14:00 UTC 2026	submitted	job id `191852` awaits release by job manager
Aug 31 14:14:46 UTC 2026	released	job awaits launch by Slurm scheduler
Aug 31 14:23:08 UTC 2026	running	job `191852` is running
Aug 31 14:32:00 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-191852.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-x86_64-generic-17881863280.tar.zst` size: 36 MiB (38212981 bytes) entries: 811 modules under 2025.06/software/linux/x86_64/generic/modules/all `BamTools/2.5.3-GCC-14.3.0.lua` `BEDTools/2.31.1-GCC-14.3.0.lua` `JsonCpp/1.9.6-GCCcore-14.3.0.lua` software under 2025.06/software/linux/x86_64/generic/software `BamTools/2.5.3-GCC-14.3.0` `BEDTools/2.31.1-GCC-14.3.0` `JsonCpp/1.9.6-GCCcore-14.3.0` reprod directories under 2025.06/software/linux/x86_64/generic/reprod `BamTools/2.5.3-GCC-14.3.0/20260831_142408UTC` `BEDTools/2.31.1-GCC-14.3.0/20260831_142512UTC` `JsonCpp/1.9.6-GCCcore-14.3.0/20260831_142335UTC` other under 2025.06/software/linux/x86_64/generic no other files in tarball
Aug 31 14:32:00 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025-foss-2024a-kokkos %scale=1_node /ade8cad7 @BotBuildTests:x86-64-generic+default P: perf: 441.432 timesteps/s (r:0, l:None, u:None) [ OK ] (2/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025_update4-foss-2025b-kokkos %scale=1_node /e121eb9c @BotBuildTests:x86-64-generic+default P: perf: 457.486 timesteps/s (r:0, l:None, u:None) [ OK ] (3/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:x86-64-generic+default P: latency: 2.45 us (r:0, l:None, u:None) [ OK ] (4/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:x86-64-generic+default P: latency: 3.16 us (r:0, l:None, u:None) [ OK ] (5/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:x86-64-generic+default P: latency: 0.63 us (r:0, l:None, u:None) [ OK ] (6/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:x86-64-generic+default P: bandwidth: 10358.51 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 6/6 test case(s) from 6 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-191852.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Aug 31 15:01:42 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-x86_64-generic-17881863280.tar.zst` to S3 bucket succeeded

eessi-bot-aws · 2026-08-31T14:14:07Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: generic
Building for: aarch64/generic
Job dir: /project/def-users/SHARED/jobs/2026.08/pr_1595/191853

date	job status	comment
Aug 31 14:14:06 UTC 2026	submitted	job id `191853` awaits release by job manager
Aug 31 14:14:37 UTC 2026	released	job awaits launch by Slurm scheduler
Aug 31 14:21:48 UTC 2026	running	job `191853` is running
Aug 31 14:25:39 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-191853.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-aarch64-generic-17881862040.tar.zst` size: 36 MiB (37913070 bytes) entries: 811 modules under 2025.06/software/linux/aarch64/generic/modules/all `BamTools/2.5.3-GCC-14.3.0.lua` `BEDTools/2.31.1-GCC-14.3.0.lua` `JsonCpp/1.9.6-GCCcore-14.3.0.lua` software under 2025.06/software/linux/aarch64/generic/software `BamTools/2.5.3-GCC-14.3.0` `BEDTools/2.31.1-GCC-14.3.0` `JsonCpp/1.9.6-GCCcore-14.3.0` reprod directories under 2025.06/software/linux/aarch64/generic/reprod `BamTools/2.5.3-GCC-14.3.0/20260831_142227UTC` `BEDTools/2.31.1-GCC-14.3.0/20260831_142310UTC` `JsonCpp/1.9.6-GCCcore-14.3.0/20260831_142201UTC` other under 2025.06/software/linux/aarch64/generic no other files in tarball
Aug 31 14:25:39 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025-foss-2024a-kokkos %scale=1_node /ade8cad7 @BotBuildTests:aarch64-generic+default P: perf: 665.397 timesteps/s (r:0, l:None, u:None) [ OK ] (2/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025_update4-foss-2025b-kokkos %scale=1_node /e121eb9c @BotBuildTests:aarch64-generic+default P: perf: 662.471 timesteps/s (r:0, l:None, u:None) [ OK ] (3/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:aarch64-generic+default P: latency: 1.96 us (r:0, l:None, u:None) [ OK ] (4/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:aarch64-generic+default P: latency: 5.46 us (r:0, l:None, u:None) [ OK ] (5/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:aarch64-generic+default P: latency: 0.29 us (r:0, l:None, u:None) [ OK ] (6/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:aarch64-generic+default P: bandwidth: 16063.48 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 6/6 test case(s) from 6 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-191853.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Aug 31 15:01:52 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-aarch64-generic-17881862040.tar.zst` to S3 bucket succeeded

eessi-bot-aws · 2026-08-31T14:14:12Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: neoverse_n1
Building for: aarch64/neoverse_n1
Job dir: /project/def-users/SHARED/jobs/2026.08/pr_1595/191854

date	job status	comment
Aug 31 14:14:11 UTC 2026	submitted	job id `191854` awaits release by job manager
Aug 31 14:14:40 UTC 2026	released	job awaits launch by Slurm scheduler
Aug 31 14:21:51 UTC 2026	running	job `191854` is running
Aug 31 14:34:24 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-191854.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-aarch64-neoverse_n1-17881865360.tar.zst` size: 36 MiB (37917154 bytes) entries: 811 modules under 2025.06/software/linux/aarch64/neoverse_n1/modules/all `BamTools/2.5.3-GCC-14.3.0.lua` `BEDTools/2.31.1-GCC-14.3.0.lua` `JsonCpp/1.9.6-GCCcore-14.3.0.lua` software under 2025.06/software/linux/aarch64/neoverse_n1/software `BamTools/2.5.3-GCC-14.3.0` `BEDTools/2.31.1-GCC-14.3.0` `JsonCpp/1.9.6-GCCcore-14.3.0` reprod directories under 2025.06/software/linux/aarch64/neoverse_n1/reprod `BamTools/2.5.3-GCC-14.3.0/20260831_142717UTC` `BEDTools/2.31.1-GCC-14.3.0/20260831_142829UTC` `JsonCpp/1.9.6-GCCcore-14.3.0/20260831_142643UTC` other under 2025.06/software/linux/aarch64/neoverse_n1 no other files in tarball
Aug 31 14:34:24 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025-foss-2024a-kokkos %scale=1_node /ade8cad7 @BotBuildTests:aarch64-neoverse_n1+default P: perf: 654.523 timesteps/s (r:0, l:None, u:None) [ OK ] (2/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025_update4-foss-2025b-kokkos %scale=1_node /e121eb9c @BotBuildTests:aarch64-neoverse_n1+default P: perf: 657.872 timesteps/s (r:0, l:None, u:None) [ OK ] (3/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:aarch64-neoverse_n1+default P: latency: 2.05 us (r:0, l:None, u:None) [ OK ] (4/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:aarch64-neoverse_n1+default P: latency: 5.53 us (r:0, l:None, u:None) [ OK ] (5/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:aarch64-neoverse_n1+default P: latency: 0.29 us (r:0, l:None, u:None) [ OK ] (6/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:aarch64-neoverse_n1+default P: bandwidth: 15431.69 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 6/6 test case(s) from 6 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-191854.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Aug 31 15:02:02 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-aarch64-neoverse_n1-17881865360.tar.zst` to S3 bucket succeeded

eessi-bot-aws · 2026-08-31T14:14:18Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: neoverse_v1
Building for: aarch64/neoverse_v1
Job dir: /project/def-users/SHARED/jobs/2026.08/pr_1595/191855

date	job status	comment
Aug 31 14:14:17 UTC 2026	submitted	job id `191855` awaits release by job manager
Aug 31 14:14:43 UTC 2026	released	job awaits launch by Slurm scheduler
Aug 31 14:16:10 UTC 2026	running	job `191855` is running
Aug 31 14:21:54 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-191855.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-aarch64-neoverse_v1-17881858080.tar.zst` size: 36 MiB (37915652 bytes) entries: 811 modules under 2025.06/software/linux/aarch64/neoverse_v1/modules/all `BamTools/2.5.3-GCC-14.3.0.lua` `BEDTools/2.31.1-GCC-14.3.0.lua` `JsonCpp/1.9.6-GCCcore-14.3.0.lua` software under 2025.06/software/linux/aarch64/neoverse_v1/software `BamTools/2.5.3-GCC-14.3.0` `BEDTools/2.31.1-GCC-14.3.0` `JsonCpp/1.9.6-GCCcore-14.3.0` reprod directories under 2025.06/software/linux/aarch64/neoverse_v1/reprod `BamTools/2.5.3-GCC-14.3.0/20260831_141601UTC` `BEDTools/2.31.1-GCC-14.3.0/20260831_141637UTC` `JsonCpp/1.9.6-GCCcore-14.3.0/20260831_141540UTC` other under 2025.06/software/linux/aarch64/neoverse_v1 no other files in tarball
Aug 31 14:21:54 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025-foss-2024a-kokkos %scale=1_node /ade8cad7 @BotBuildTests:aarch64-neoverse_v1+default P: perf: 973.17 timesteps/s (r:0, l:None, u:None) [ OK ] (2/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025_update4-foss-2025b-kokkos %scale=1_node /e121eb9c @BotBuildTests:aarch64-neoverse_v1+default P: perf: 941.223 timesteps/s (r:0, l:None, u:None) [ OK ] (3/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:aarch64-neoverse_v1+default P: latency: 1.63 us (r:0, l:None, u:None) [ OK ] (4/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:aarch64-neoverse_v1+default P: latency: 5.33 us (r:0, l:None, u:None) [ OK ] (5/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:aarch64-neoverse_v1+default P: latency: 0.25 us (r:0, l:None, u:None) [ OK ] (6/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:aarch64-neoverse_v1+default P: bandwidth: 28542.86 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 6/6 test case(s) from 6 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-191855.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Aug 31 15:02:12 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-aarch64-neoverse_v1-17881858080.tar.zst` to S3 bucket succeeded

bedroge · 2026-08-31T17:06:07Z

Software tarballs have been ingested

{2025.06}[GCC/14.3.0] BEDTools 2.31.1

144a1d8

bedroge added the 2025.06-software.eessi.io 2025.06 version of software.eessi.io label Aug 31, 2026

bedroge approved these changes Aug 31, 2026

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bedroge added the bot:deploy Ask bot to deploy missing software installations to EESSI label Aug 31, 2026

bedroge merged commit ec7118f into EESSI:main Aug 31, 2026
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