Register CLEM data in ISPyB#689

Merged

tieneupin merged 21 commits into

mainfrom

register-clem-data-collection

Nov 6, 2025

Commits on Oct 29, 2025

Create additional fluorescent-only and bright field-only composite images
tieneupin
committed
Import Murfey database classes differently, to eventually differentiate them from ISPyB database tables
tieneupin
committed

Commits on Nov 4, 2025

Added more database columns to 'CLEMImageSeries' table to keep track of image shape, pixel size, and spatial location on grid
tieneupin
committed
Broke 'register_preprocessing_results' workflow down into smaller functions for the sake of readability
tieneupin
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Added new optional fields into 'GridSquareParameters' table to stored scaled down information about the grid squares being registered
tieneupin
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Migrated logic for rescaling grid square values into the 'flush_spa_preprocess' workflow instead, so that the grid square registration and updating functions just register the values as-is
tieneupin
committed
Return failure result if unable to load Murfey session information
tieneupin
committed