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feat: Allow file tool access to companion files under ~/.cptr/skills/ #145

Description

@Aspect250

I have encountered a problem regarding the current skills implementation not allowing native tools to access files other than the SKILL.md in the global skills directory.

view_skill works for the SKILL.md, but any reference files wanted by the skill can only be called via terminal using cat for the reference files as read_file etc are rejected as the global skills folder is a "Path outside allowed directories".

This is not ideal for any skill that is more than just the SKILL.md file, like those that adhere to the Agent Skills standard

If we can get this looked at and allow file tools to read from ~/.cptr/skills/ that would be great.

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