From c1b06fb3d3819f45f203ac34c5968639b96ce3eb Mon Sep 17 00:00:00 2001
From: Carlos Osuna <carlos.osuna@meteoswiss.ch>
Date: Thu, 25 Jun 2026 22:31:18 +0200
Subject: [PATCH] latency_wait

---
 src/evalml/cli.py | 6 ++++++
 1 file changed, 6 insertions(+)

diff --git a/src/evalml/cli.py b/src/evalml/cli.py
index f3df3bf4..e326c6a2 100644
--- a/src/evalml/cli.py
+++ b/src/evalml/cli.py
@@ -26,6 +26,12 @@ def _base_snakemake_command(
     command += config.profile.parsable()
     command += ["--configfile", str(configfile)]
     command += ["--cores", str(cores)]
+    # Lustre (and other network filesystems on Balfrin) can have significant
+    # latency between a job writing an output file and it becoming visible to
+    # the Snakemake process on the login node. This flag overwrites the default 
+    # of 5s in an attempt to make the workflow more resilient to the underlying
+    # filesystem
+    command += ["--latency-wait", "20"]
     return command